Chapter 1 - Biological Molecules Flashcards Preview

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Flashcards in Chapter 1 - Biological Molecules Deck (99)
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1
Q

what are carbohydrates

A

compounds comprising only of hydrogen carbon and oxygen units

2
Q

what type of molecule is a carbohydrate

A

a polymer

3
Q

characteristics of polymers

A

long complex molecules made of chains of monomers

4
Q

examples of three monomers

A

monosaccharides
amino acids
nucleotides

5
Q

what are the monomers of carbohydrates

A

monosaccharides

6
Q

examples of monosaccharides 3

A

glucose fructose and galactose

7
Q

what type of sugar is glucose and why

A

hexose sugar - it had 6 hydrogen atoms

8
Q

glucose + glucose =

A

maltose

9
Q

glucose + fructose =

A

sucrose

10
Q

glucose + galactose =

A

lactose

11
Q

what are the two types of glucose

A

alpha and beta glucose

12
Q

what are isomers

A

molecules with the same molecular formula but the atoms are bonded in a different way

13
Q

what is a condensation reaction

A

two monosaccharides join together to form a disaccharide and a molecule of water is produced

14
Q

what bond is formed in a disaccharide

A

glycosidic

15
Q

what can a hydrolysis reaction do

A

break apart polymers

16
Q

how does a hydrolysis reaction work

A

it breaks the glycosidic bond in a disaccharide using a water molecule to form the original monosaccharides ut only under the correct conditions

17
Q

what are reducing sugars

A

chemicals that readily reduce other when in solution

18
Q

how to test for a reducing sugar

A

add 1cm3 sugar to test tube
add 1cm3 benedicts reagent
heat in a water bath at 70c for 4 minutes

19
Q

positive result for benedicts test for reducing sugar

A

goes brick red if a lot of sugar is present

20
Q

how to test for a non reducing sugar

A

add 1cm3 solution to test tube
add 1cm3 hydrochloric acid to hydrolyse the sugar
add sodium carbonate until universal indicator paper turns green
add 1cm3 benedicts solution
place in a water bath at 70c for 4 minutes

21
Q

non reducing result for benedicts test for non reducing sugars

A

goes brick red

22
Q

when are polysaccharides formed

A

when more than two monosaccharides join together in a condensation reaction

23
Q

examples of polysaccharides 3

A

starch glycogen and cellulose

24
Q

which monomers make up cellulose

A

beta glucose

25
Q

structure of cellulose

A

straight unbranched chains of beta glucose run parallel to each other
hydrogen bonds form between the chains
this forms microfibrils which group to make fibres

26
Q

function of cellulose

A

structural support

27
Q

which monomers make up glycogen

A

alpha glucose

28
Q

structure of glycogen

A

large branched chains of alpha glucose provide a large surface area for enzymes to act upon

29
Q

function of glycogen

A

stores glucose to be released when we need it

30
Q

how do you test for starch

A

add a solution of iodine dissolved in potassium iodide solution and it should change from brown to blue black

31
Q

function of starch

A

plant store excess glucose as starch so it can be broken down into glucose when the plant needs energy

32
Q

advantages of starch 2

A

large so can’t fit through cell membranes to upset osmotic potential
insoluble so doesn’t impact osmotic potential balance

33
Q

which monomers make up starch

A

alpha glucose

34
Q

structure of starch

A

made of two alpha glucose polysaccharides
amylose- long unbranched chains which coil up and make it very compact
amylopectin - long branched chain of glucose which provides a large surface area for enzymes to act on

35
Q

what are triglycerides

A

one molecule of glycerol with three fatty acids tail

36
Q

what are the fatty acids made from

A

hydrocarbons

37
Q

are fatty acids tails hydrophilic or phobia

A

hydrophobic they repel water

38
Q

how are triglycerides produced

A

a condensation reaction occurs between one fatty acid tail and the glycerol molecule forming an ester bond and a molecule of water
this happens three times

39
Q

bonding in triglycerides

A

ester

40
Q

how many molecules of water are released when a triglyceride is made

A

3

41
Q

what are the two kinds of fatty acids

A

unsaturated and saturated

42
Q

difference between saturated and unsaturated fatty acids

A

unsaturated fatty acids have double carbon bond which means that the maximum amount of hydrogen isn’t present
this also causes a characteristic kink

43
Q

what are phospholipids

A

one molecule of glycerol

two fatty acid tails and one phosphate tails

44
Q

is the phosphate tail hydrophilic or phobic

A

hydrophilic

45
Q

how to test for lipids

A

use the emulsion tesy
take a completely dry and grease free test tube
add 2cm3 sample and 5cm3 ethanol
shake to dissolve any lipids
add 5cm3 water and shake again
if lipids are present a white precipitate will form

46
Q

functions of phospholipids

A

make up a bilayer of cell membranes

47
Q

why do phospholipids form a bilayer of cell membranes

A

the heads phosphate group are hydrophilic and interact with the water whilst the bodies fatty acids are hydrophobic so water substances can’t easily pass through

48
Q

functions of triglycerides 2

A

heat insulation

energy storage molecules

49
Q

why are triglycerides used as storage molecules

A

the hydrocarbon tails contain a lot of energy which is released when they are broken down
they are insoluble so they don’t affect the osmotic balance of the cell because of their hydrophobic tails and the glycerol heads act like a barrier

50
Q

what are the monomers of proteins

A

amino acids

51
Q

what is a polypeptide

A

when more than two amino acids join together

52
Q

what is a dipeptide

A

when two amino acids join together

53
Q

what are proteins made from

A

multiple polypeptides

54
Q

what will all amino acids contain

A

an amine and a carboxyl group

55
Q

what varies between amino acids

A

the r group

56
Q

formula for amine group

A

NH2

57
Q

Formula for carboxyl group

A

COOH

58
Q

How are polypeptides formed

A

condensation reaction of amino acids

59
Q

when does the reverse reaction for making proteins happen

A

digestion

60
Q

what s the bond in polypeptides

A

peptide bond

61
Q

how many molecules of water are released

A

1 molecule

62
Q

what is the primary structure of a protein

A

the sequence of multiple amino acids in a polypeptide chain

63
Q

what is the secondary structure of protein

A

hydrogen bonds form between the amino acids in the polypeptide chain turning it into a beta pleated sheet or an alpha coil

64
Q

what is the tertiary structure of a protein

A

the coiled chain of amino acids coils further. more bonds form between different parts of polypeptides

65
Q

when will the tertiary structure of a protein be its final structure

A

when it is made form one single polypeptide chain

66
Q

what are the three bonds in the tertiary structure of a protein

A

disulfide bridges
ionic bonds
hydrogen bonds

67
Q

when will disulphide bonds form

A

between the sulphurs in the r group of two amino acids

68
Q

what is the quaternary structure of a protein

A

numerous polypeptide chains are held together by bonds

69
Q

when will the quaternary structure of a protein be its final structure

A

when it is made from multiple polypeptide chains

70
Q

what is special about the quaternary structure of a protein

A

it may include a prosthetic group (a non protein group )

71
Q

what are the four main jobs of proteins

A

antibodies
enzymes
transport proteins
structural proteins

72
Q

characteristics of enzymes

A

they roughly spherical in shape because of the tight folding of the polypeptide chains
soluble
have roles in metabolism

73
Q

characteristics of structural proteins

A

long polypeptide chains lying parallel to each other with crosslink between them

74
Q

characteristics of antibodies

A

two short and two long polypeptide chains bonded together

75
Q

characteristics of transport proteins

A

channel proteins found in cell membranes contain both hydrophobic and hydrophilic amino acids which cause the protein to fold up and form a channel along which substances can travel

76
Q

what is the test for proteins

A

add sodium hydroxide solution to the sample to make it alkaline
add copper II sulphate solution
purple - protein
blue - no protein

77
Q

what are enzymes

A

biological catalysts that lower the activation energy of a reaction without being affected themselves

78
Q

how do enzymes lower the activation energy of a reaction

A

if a substrates are to be joined together being attached to the enzymes holds them close and overcomes any repulsion
if a substrate is to be broken down then fitting it into the active site puts a strain on the bonds so it easier to break

79
Q

what is the lock and key model

A

the substrate fits into the active site in the same way a key does to a lock

80
Q

what is the induced fit model of enzyme action

A

the active site can change to accommodate the substrate if they aren’t complimentary

81
Q

why will enzymes only catalyse one reaction

A

every enzyme has a tertiary structure and a different shaped active site which can be impacted by pH or temperature
this means that only one substrate is complimentary and so will be broken down

82
Q

what is the effect of temperature of enzymes

A

a rise in temperature increases the kinetic energy of the molecules which leads to an increase in more successful collisions and more enzyme substrate completed being completed

83
Q

what happens when the temperature gets too high

A

the vibrating molecules break some of the bonds that hold the active site in shape so the enzyme substrate are no longer complimentary
the enzyme has denatures

84
Q

what is the effect of pH on enzyme activity

A

at any other pH other than the optimum the OH- and H= ions mess up the hydrogen bonds in the proteins tertiary structure
this makes the active site change shape and the enzyme is denatured

85
Q

how does the enzyme concentration affect the rate of reaction

A

the more enzyme molecules there are the more likely that an enzyme substrate complex will be formed. if the concentration is limited then it will have no further effect

86
Q

how does substrate concentration affect the rate of reaction

A

the higher substrate concentration the higher the rate of reaction because collisions will be more likely
after saturation point through all the active sites are full and so an increase in substrate conenctration makes no difference

87
Q

what are competitive inhibitors and how do they work

A

competitive inhibitors have a similar shape to the substrate so they directly compete for the active site
when they bind they block the active site so no enzyme substrate complexes can be formed

88
Q

are competitive inhibitors affected by substrate concentrations

A

yes a higher concentration of substrate means that there is a lower chance of the inhibitor binding successfully to the active site
this increases the rate of reaction

89
Q

what are non competitive inhibitors and how do they work

A

they bind to the allosteric site of the enzyme and cause the active site to change shape so the substrate can’t bind and create a complex

90
Q

are non competitive inhibitors affected by substrate concentration

A

no they don’t compete with the substrate for the active site

91
Q

what is covalent bondign

A

atoms share a pair of electrons in their outer shell

92
Q

what is ionic bonding

A

ions with opposite charges attract each other electrostatic attractions

93
Q

what is hydrogen bonding

A

the electrons in a bond aren’t very evenly spread between the two atoms
this forms a polar molecule because one region is more electronegative than another

94
Q

what is metabolism

A

all the chemical reactions that take place in an organisms

95
Q

what is a molar solution

A

a solution containing one mole of solute in each litre of solution

96
Q

why do most molecules contain carbon

A

they form bonds readily so form a carbon backbone

97
Q

why does benedicts reagent turn red when heated with a reducing sugar

A

the sugar donates electrons that turn the blue copper ii sulfate to red copper I oxide

98
Q

what is produced when maltose is hydrolysed

A

glucose

99
Q

what is produced when starch is hydrolysed

A

maltose